Nizar Messai Home Page

Main courses : Knowledge representation and reasoning, Semantic Web, Text mining,. Design patterns, Distribution and cooperation, Networks (IP, Peer-to-Peer ...
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Nizar MESSAI Birthday : June 02 1979 Nationality : Tunisian Address : LORIA / INRIA Nancy - Grand Est, ORPAILLEUR Team Campus Scientifique, B.P.239 54506 Vandœuvre-L`es-Nancy Cedex FRANCE Phone : +33 (0) 3 83 59 20 55 Cellular : +33 (0) 6 85 09 36 36 E-mail : [email protected] Homepage : http://www.loria.fr/~messai

CURRENT SITUATION IN 2008-2009 Part-time Assistant professor (ATER) University : University UHP Nancy 1 / UFR - STMIA Department : Computer Science End of contract : August 31, 2009

GRADUATIONS 2009

Phd in Computer Science, UHP Nancy I, Nancy, France Title : Formal Concept Analysis guided by domain knowledge : Application to biological resources retrieval on the Web. University : UHP Nancy 1, Nancy, France Laboratory : LORIA / INRIA Nancy - Grand Est Team : ORPAILLEUR Supervisors : Amedeo Napoli Co-supervisors : Marie-Dominique Devignes and Malika Smail-Tabbone Thesis defence : March 20, 2009

2004

Master in Computer Science, UHP Nancy I, Nancy, France Graduation project : Concept Lattices and Domain Ontologies for genomic data sources classification and retrieval Supervisors : Amedeo Napoli Co-supervisors : Marie-Dominique Devignes and Malika Smail-Tabbone Affiliation : ORPAILLEUR Team, LORIA-INRIA, Nancy, FRANCE Main courses : Knowledge representation and reasoning, Semantic Web, Text mining, Design patterns, Distribution and cooperation, Networks (IP, Peer-to-Peer, Routing and organisation of dynamic networks, Quality of services), Real time scheduling

2000 - 2003

1998 - 2000 1999

Engineering Diploma in Computer Science, Faculty of Science of Tunis, Tunisia. Graduation project (February - June 2003) : Developing and integrating Web services in DISCOBOLE cooperation framework Affiliation : ECOO Team, LORIA-INRIA, Nancy, France Engineer training project (August 2002) : Design and development of an OSindependent Internet navigator with arabic interface Affiliation : SOTETEL-IT, Tunisian society of enterprises of telecommunication, and information technologies Preparation for Engineering studies, Engineering Preparatory Institute of Sousse, Tunisia Baccalaureate section Mathematics, Tunisia

TRAINING COURSES 2006

2005 2004

ICCL Summer School 2006 Knowledge Structures. Technische Universit¨ at, Dresden, Germany. Juin 24 - July 8 2006. textscMain courses : Reasoning in Description Logics (Franz Baader), Knowledge, Reasoning, and the Semantic Web (Pascal Hitzler), Formal Concept Analysis (Bernhard Ganter), Text clustering and Semantic Web mining (Andreas Hotho), Inductive Logic Programming (Stefan Kramer), Knowledge Discovery with Formal Concept Analysis (Sergei Kuznetsov), Survey of clustering algorithms : applications to biomedicine and software engineering (Bill Andreopoulos) INRIA training courses : Scientific Writing, INRIA-LORIA, Nancy, FRANCE, October 2005 INRIA engineer contract : Design and development of a prototype for genomic data sources classification and retrieval, ORPAILLEUR Team, LORIA-INRIA, Nancy, France, July - September 2004

ACADEMIC AREAS OF SPECIALIZATION Research Areas Semantic based information retrieval Semantic based complex data analysis Formal concept analysis, Fuzzy formal concept analysis, and Many-valued formal concept analysis Complex data mining Knowledge representation and knowledge extraction Bioinfomatics Publications summary International conferences : 5 papers (ECAI’08, ICCS’08, CLA’06, ICCS’05, CompLife’05), 1 poster (ICFCA’06) International workshops : 2 papers (RED’08, W3C’04) French journals : 3 papers (RNTI’08, RTSI/ISI’06, RNTI’05) French conferences : 2 papers (AFIA-IC’07, INFORSID’05) French workshops : 1 paper (EGC’O5 - MC)

TEACHING EXPERIENCE Year

07-09

Period

Course Label

Level

Oct-Jan

Relational Databases

Master 2

Oct-Dec

Office automation tools

Bachelor 1

Oct-Nov

XML

Master 2

Feb-Apr 06-07 Oct-Jan Feb-May 05-06 Oct-Jan Mar-Jun 04-05 March Mar-May 03-04 Feb-May

Algo - JAVA Programming Office automation tools Office automation tools Office automation tools Algo - JAVA Programming XML Servlet-JSP JDBC Office automation tools

Bachelor 1 Bachelor 1 Bachelor 2 Bachelor 1 Bachelor 2 Bachelor 3 Master 2 Bachelor 2 Bachelor 1

High Institute University STMIA UHP-Nancy1

Volume in hours Lecture Tutorial Labs 45

STMIA UHP-Nancy1

32 40

ESIAL UHP-Nancy1 IUT NB UHP-Nancy1 PLG Univ. Nancy2 CLSH Univ. Nancy2 UFR Droit Univ. Nancy2 ENSEM INPL

35

24

28

48 36 36 45 9

12

4 38 58

SKILLS General computer knowledge Programming languages (Java, Servlet/JSP, PHP, C, C++) Software design and Object oriented programming (UML, Design Pattern) Information systems design and relational databases (MySQL, Oracle, SQL/PLSQL) OS : MS Windows, Unix/Linux Web technologies Programming : HTML, Servlet/JSP, PHP XML : XML, XSLT/XSLFO, XML-SCHEMA, DTD, SAX/DOM, JDOM, Oxyg`ene Semantic Web : RDF/RDFS, OWL, JENA, Prot´eg´e Web Services : SOAP, WSDL, UDDI Logics First order and second order logic, Description logics, and Fuzzy logic Languages Arabic : native language French : fluent English : fluent (Threshold level in Wall Streat Institute - Nancy (Feb-Dec 2006)) Others Hobbies : Sports (football, cycling, running), travelling Driving : Driving licence B.

PUBLICATIONS 2008

Devignes MD, Franiatte P, Messai N, Napoli A, Sma¨ıl-Tabbone M : BioRegistry : Automatic Extraction of Metadata for Biological Database Retrieval and Discovery. 1st International Workshop on REsource Discovery RED 2008, ACM, 24-26 November 2008, Linz, Austria. Messai N, Devignes MD, Napoli A, Sma¨ıl-Tabbone M : Many-valued concept lattices for conceptual clustering and information retrieval. 18th biennial European Conference on Artificial Intelligence, ECAI 2008. IOS Press, pages 127-131. 21-25 July, Patras, Greece. Messai N, Devignes MD, Napoli A, Sma¨ıl-Tabbone M : Extending attribute dependencies for lattice-based querying and navigation. 16th International Conference on Conceptual Structures ICCS’08 - Conceptual Structures : Knowledge Visualization and Reasoning. LNAI, volume 5113, pages 189-202. Springer-Verlag Berlin Heidelberg, 2005. 7-11 July, Toulouse, France Messai N, Devignes MD, Napoli A, Sma¨ıl-Tabbone M : Correction et compl´etude d’un algorithme de recherche d’information par treillis de concepts. Revue RNTI-C-2. Classification : points de vue crois´es, pages 147-158. Avril 2008, C´epaudeu`es ´editions.

2007

Messai N, Devignes MD, Napoli A, Sma¨ıl-Tabbone M : Traitement d’attributs interd´ependants pour la recherche d’information par treillis. 18e Journ´ees Francophones d’Ing´enierie des Connaissances, IC 2007 (Plate-forme AFIA 2007). 02-06 Juillet 2007, Grenoble, France.

2006

Messai N, Devignes MD, Napoli A, Sma¨ıl-Tabbone M : BR-Explorer : An FCA-based algorithm for Information Retrieval. 4th International Conference on Concept Lattices and their Applications, CLA 2006, proceedings, pages 285-290. October 30 - November 1st, 2006, Yasmine Hammamet, Tunisia. Messai N, Devignes MD, Napoli A, Sma¨ıl-Tabbone M : BR-Explorer : A sound and complete FCA-based retrieval algorithm. 4th International Conference on Formal Concept Analysis, ICFCA 2006. February 13-17, 2005, Dresden, Germany. Poster session. Messai N, Devignes MD, Napoli A, Sma¨ıl-Tabbone M : Treillis de concepts et ontologies pour l’interrogation d’un annuaire de sources de donn´ees biologiques (BioRegistry) (version ´etendue). Revue RSTI/ISI : Syst`emes d’information sp´ecialis´es, volume 11, n 1, janvier - f´evrier 2006, pages 39-60.

2005

Sma¨ıl-Tabbone M, Osman S, Messai N, Napoli A, Devignes MD : BioRegistry : A Structured Metadata Repository for Bioinformatic Databases. In Michael R. Berthold, Robert Glen, Kay Diederichs, Oliver Kohlbacher, Ingrid Fischer, editor, Computational Life Sciences : First International Symposium, CompLife 2005, Konstanz, Germany, September 25-27, 2005, Proceedings. LNAI, volume 3695, pages 46-56. Springer-Verlag Berlin Heidelberg, 2005. Messai N, Devignes MD, Napoli A, Sma¨ıl-Tabbone M : M´ethode s´emantique pour la classification et l’interrogation des sources de donn´ees g´enomiques. Revue RNTI : ´ Extraction des connaissances, Etat et perspectives. C´epadues Editions, Novembre 2005, pages 43-47. Messai N, Devignes MD, Napoli A, Sma¨ıl-Tabbone M : Querying a bioinformatic data sources registry with concept lattices. In F. Dau, M.-L. Mugnier, G. Stumme, editor, 13th International Conference on Conceptual Structures, ICCS 2005, Conceptual Structures : Common Semantics for Sharing Knowledge, July 18-22, 2005, Kassel, Germany, Proceedings. LNAI, volume 3596, pages 323-336. Springer-Verlag Berlin Heidelberg, 2005. Messai N, Devignes MD, Napoli A, Sma¨ıl-Tabbone M : Treillis de concepts et ontologies pour l’interrogation d’un annuaire de sources de donn´ees biologiques (BioRegistry). Actes du 18 `eme congr`es informatique des organisations et syst`emes d’information et de d´ecision, INFORSID 2005, Grenoble 24-27 Mai 2005, pages 587-602.

2004

Devignes MD, Messai N, Napoli A, Osman S, Sma¨ıl-Tabbone M : Intelligent access to genomic sources on the web. W3C Workshop on Semantic Web for Life Sciences. October 27-28, 2004, Cambridge, Massachusetts USA. (Position paper) Messai N. : Treillis de Galois et ontologies de domaine pour la classification et la recherche de sources de donn´ees g´enomiques. Rapport de DEA, Juin 2004, UHP Nancy I.

SCIENTIFIC REFEREES Amedeo Napoli (Supervisor) Phone : (+33)3.83.59.20.68 Email : [email protected] Homepage : http://www.loria.fr/~napoli Marie-Dominique Devignes Phone : (+33)3.83.59.20.55 Email : [email protected] Homepage : http://www.loria.fr/~devignes Malika Sma¨ıl-Tabbone Phone : (+33)3.83.59.20.55 Email : [email protected] Homepage : http://www.loria.fr/~malika